The detailed information of tRNA gene sequence


Sequence ID>PL171000157
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 4343
End posion on genome 4269
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gccacctcaa
tRNA gene sequence 
GGGAATGTAACTCAGTTGGTTTAGAGTGCCTGTCTGTCGAACAGGAAGTCGTGGGTTCAA
ATCCCATCATTCCCGtgt
Downstream region at tRNA end position 
agccttgtga
Secondary structure (Cloverleaf model)
>PL171000157	Asp	GTC
                   a      Gtgt agccttgtga
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     T A C C C     A
    T T G A        A      + | | | |     A
  G         C T C A       G T G G G     C
  G         | | | |                 T T
  T         G A G T
    T T A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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