The detailed information of tRNA gene sequence


Sequence ID>PL171000158
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 4107
End posion on genome 4032
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttcaatcat
tRNA gene sequence 
CGCAGTGTCACCTAATGGTTAAGGTACTCGGCTCATAACCGAGGATATGCGGGTTCAAAT
CCCGCCACTGCCACTA
Downstream region at tRNA end position 
atgcagagat
Secondary structure (Cloverleaf model)
>PL171000158	Met	CAT
                   t      ACTA atgcagagat
                     C   C
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      T A A        C      | | | | |     A
    G       T C C A       G C G G G     C
    G       | | | |                 T T
    T       A G G T
      T A          A     GATAT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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