The detailed information of tRNA gene sequence


Sequence ID>PL171000162
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 3594
End posion on genome 3520
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tctcgcctat
tRNA gene sequence 
CCCCTGGTAGCTCAGTTGGTAGTAGCGCCTGTCTGAAGAACAGGAGGTCGTCAGTTCGAT
TCTGACCTAGGGGGCtt
Downstream region at tRNA end position 
tcattgccct
Secondary structure (Cloverleaf model)
>PL171000162	Phe	GAA
                   t      GCtt tcattgccct
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C          T T
                    T     C A G T C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C A G     C
    G         | | |                 T T
    G       T A G C
      T A G        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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