The detailed information of tRNA gene sequence


Sequence ID>PL171000165
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 3145
End posion on genome 3071
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcagtattat
tRNA gene sequence 
CCGGGTGTAGCGCAGTTTGGTAGCGCATCTGTTTTGGGAGCAGAGGGTCGCAGGTTCAAG
TCCTGCCACTCGGACtt
Downstream region at tRNA end position 
gtgggcgttt
Secondary structure (Cloverleaf model)
>PL171000165	Pro	TGG
                   t      ACtt gtgggcgttt
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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