The detailed information of tRNA gene sequence


Sequence ID>PL171000167
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 2852
End posion on genome 2778
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtttaaaagt
tRNA gene sequence 
GCTGGTGTGGCTCAACGGCAGAGCAACTGATTTGTAATCAGTAGGTTGCAGGTTCGATTC
CTGTCACCAGCTTCA
Downstream region at tRNA end position 
atgcgattgt
Secondary structure (Cloverleaf model)
>PL171000167	Thr	TGT
                   t      TTCA atgcgattgt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T G T C C     A
        A A        G      + | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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