The detailed information of tRNA gene sequence


Sequence ID>PL171000169
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 2699
End posion on genome 2624
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcgctttgat
tRNA gene sequence 
AGTCCCGTAGCTCAGTTGGTAGAGTGCCTTCCTTACAAGCAGGATGTCACAGGTTCGATT
CCTGTCGGGACTACCA
Downstream region at tRNA end position 
aattatggga
Secondary structure (Cloverleaf model)
>PL171000169	Val	TAC
                   t      ACCA aattatggga
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    T   C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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