The detailed information of tRNA gene sequence


Sequence ID>PL171000170
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 2617
End posion on genome 2542
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
accaaattat
tRNA gene sequence 
GGGAGTGTAGCCTAATGGATGAGGCAACCGTCTTCTAAACGGTTTCATGTGGGTTCAAGT
CCTACCACTCCTGCTA
Downstream region at tRNA end position 
tatggggtca
Secondary structure (Cloverleaf model)
>PL171000170	Arg	TCT
                   t      GCTA tatggggtca
                     G + T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | + | |     A
    G       T C C G       G T G G G     C
    G       | | | |                 T T
    A       A G G C
      T G          A     TTCAT
                    A - T
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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