The detailed information of tRNA gene sequence


Sequence ID>PL171000171
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 2538
End posion on genome 2464
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cctgctatat
tRNA gene sequence 
GGGGTCATAGCTCAATTGGCTAGAGCATCCGCCTTGCACGCGGAAGGTTAGGGGTTCAAG
TCCCCTTGACTCCACtg
Downstream region at tRNA end position 
tggtgtcaga
Secondary structure (Cloverleaf model)
>PL171000171	Ala	TGC
                   t      ACtg tggtgtcaga
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     A - T          T G
                    T     T C C C C     A
      T A A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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