The detailed information of tRNA gene sequence


Sequence ID>PL171000172
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 2459
End posion on genome 2384
Amino Acid Pseudo
Anticodon GTG
Upstream region at tRNA start position 
ctccactgtg
tRNA gene sequence 
GTGTCAGAAGTCAAAGTGGTCGAGACGCTTGTCTGTGGAACAAGTAATTAGGGAGTTCAA
GTCTCCTCTGACACCCgt
Downstream region at tRNA end position 
ttatggaagc
Secondary structure (Cloverleaf model)
>PL171000172	Pseudo	GTG
                   g      CCgt ttatggaagc
                     G - C
                     T - A
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    A     T C C T C     A
      G A A        A      + | | | |     A
    T       A C T G       G G G A G     C
    G         | | |                 T T
    G       A G A C
      T C G        G     TAATTA
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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