The detailed information of tRNA gene sequence


Sequence ID>PL171000176
Genome IDAP018237
Search identical group
Phylum/ClassCyanobacteria
SpeciesFremyella diplosiphon NIES-3275 plasmid:plasmid04
Start position on genome 100245
End posion on genome 100319
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ctcgccttac
tRNA gene sequence 
CCCCTGGTAGCTCAGTTGGTAATAGCGCCTGTTTGAAAAATAGGAGGTCATCCGTTCAAT
CCGGATCTGGGGGACtg
Downstream region at tRNA end position 
gcacattgcc
Secondary structure (Cloverleaf model)
>PL171000176	Phe	GAA
                   c      ACtg gcacattgcc
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G + T
                     G - C          C T
                    T     T A G G C     A
      T G A        A      | | | | |     A
    T       C T C G       A T C C G     C
    G         | | |                 T T
    G       T A G C
      T A A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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