The detailed information of tRNA gene sequence


Sequence ID>PL171000178
Genome IDAP018237
Search identical group
Phylum/ClassCyanobacteria
SpeciesFremyella diplosiphon NIES-3275 plasmid:plasmid04
Start position on genome 100570
End posion on genome 100645
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcagtattaT
tRNA gene sequence 
CCGGGTGTGGTGTAGCTTGGCAGCACTCCTGTTTTGGGAACAGGCGGTCGTAGGTTCAAA
TCCTACCACTCGGATtc
Downstream region at tRNA end position 
atgggtcgtt
Secondary structure (Cloverleaf model)
>PL171000178	Pro	TGG
                   T      ATtc atgggtcgtt
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    T       T G T G       G T A G G     C
    T       + | | |                 T T
    G       G C A C
      G C A        T     CGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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