The detailed information of tRNA gene sequence


Sequence ID>PL171000180
Genome IDAP018237
Search identical group
Phylum/ClassCyanobacteria
SpeciesFremyella diplosiphon NIES-3275 plasmid:plasmid04
Start position on genome 102441
End posion on genome 102514
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtctactttt
tRNA gene sequence 
GCTGGTGTAGCTCAATGTGGCAGAGCAACTGACTTGTAATCAGTAGGTTGCGGGTTCAAC
TCCTGTCACCAGCTtaa
Downstream region at tRNA end position 
ctaacgcgat
Secondary structure (Cloverleaf model)
>PL171000180	Thr	TGT
                   t      Ttaa ctaacgcgat
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    T     T G T C C     A
      T A A        A      + | + | |     A
    G       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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