The detailed information of tRNA gene sequence


Sequence ID>PL171000185
Genome IDAP018274
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix sp. NIES-4101 plasmid:plasmid1
Start position on genome 56497
End posion on genome 56583
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctacatataT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCGCACTCGAAATGCGTTTTAGGGCAACCTAAC
GGGGGTTCGAATCCCCCCTTCTCCGTtt
Downstream region at tRNA end position 
atgactaatt
Secondary structure (Cloverleaf model)
>PL171000185	Ser	CGA
                   T      GTtt atgactaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TTTAGGGCAACCTAAC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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