The detailed information of tRNA gene sequence


Sequence ID>PL171000186
Genome IDAP018274
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix sp. NIES-4101 plasmid:plasmid1
Start position on genome 365099
End posion on genome 365172
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
atcgctatta
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCGCCACTTTGGGGTAGTGGAGGTCGTGGGTTCGAA
TCCCGCCGCTCCGAttt
Downstream region at tRNA end position 
ttagtattta
Secondary structure (Cloverleaf model)
>PL171000186	Pro	GGG
                   a      Attt ttagtattta
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    T - A
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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