The detailed information of tRNA gene sequence


Sequence ID>PL171000189
Genome IDAP018274
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix sp. NIES-4101 plasmid:plasmid1
Start position on genome 2101785
End posion on genome 2101860
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaaactgtgT
tRNA gene sequence 
CGGGATGTAGCGCAGCTTGGTAGCGCACTTCGTTCGGGACGAAGGGGCCGCTGGTTCGAA
TCCAGTCATCCCGATtt
Downstream region at tRNA end position 
ttattgagat
Secondary structure (Cloverleaf model)
>PL171000189	Pro	CGG
                   T      ATtt ttattgagat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    T       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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