The detailed information of tRNA gene sequence


Sequence ID>PL171000195
Genome IDAP018275
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix sp. NIES-4101 plasmid:plasmid2
Start position on genome 10537
End posion on genome 10614
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgccatactT
tRNA gene sequence 
GGGGGTGTAGCTTAGTCCGGCTAAAAGCAGTCGCCTGTCGAGCGAAAGATCGTGGGTTCA
AATCCCATCATCCCCGTgt
Downstream region at tRNA end position 
gtagccttgt
Secondary structure (Cloverleaf model)
>PL171000195	Asp	GTC
                   T      GTgt gtagccttgt
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T A C C C     A
    C T G A        A      + | | | |     A
  C         T T C G       G T G G G     C
  G         | | | |                 T T
  G         A A G C
    C T A A        A     AGATC
                    G   A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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