The detailed information of tRNA gene sequence


Sequence ID>PL171000198
Genome IDAP018275
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix sp. NIES-4101 plasmid:plasmid2
Start position on genome 11220
End posion on genome 11292
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ctccgccttt
tRNA gene sequence 
GAGGACGTGGTGTAACGGAGAACATACCAGGTTTCGACCCTGATGATGAGGGTTCAATTC
CTTCCGTCCTCGCtt
Downstream region at tRNA end position 
tatcccccgg
Secondary structure (Cloverleaf model)
>PL171000198	Arg	TCG
                   t      GCtt tatcccccgg
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     C T T C C     A
      C A A        G      | | + | |     A
    G       T G T G       G A G G G     C
    G       | | | +                 T T
    A       A C A T
      G A          A     TGAT
                    C   A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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