The detailed information of tRNA gene sequence


Sequence ID>PL171000206
Genome IDAP018275
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix sp. NIES-4101 plasmid:plasmid2
Start position on genome 12144
End posion on genome 12217
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgctaaatat
tRNA gene sequence 
GGGTCTGTAGCTTAACTGGGAAAGCGTCTGCCTTGCAAGCAGAAAGATGTCGGTTCAAAT
CCGACCAGTATCCAct
Downstream region at tRNA end position 
gatggtgttt
Secondary structure (Cloverleaf model)
>PL171000206	Ala	TGC
                   t      CAct gatggtgttt
                     G - C
                     G + T
                     G   A
                     T   T
                     C - G
                     T - A
                     G - C          T A
                    T     C A G C C     A
      C A A        A      | | | | |     A
    T       T T C G       G T C G G     C
    G       | | | |                 T T
    G       A A G C
      G A          G     AAGAT
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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