The detailed information of tRNA gene sequence


Sequence ID>PL171000207
Genome IDAP018299
Search identical group
Phylum/ClassCyanobacteria
SpeciesFischerella sp. NIES-4106 plasmid:plasmid1
Start position on genome 283584
End posion on genome 283660
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatcaagtat
tRNA gene sequence 
GTGGGGATAGTGTAACTAGGTAACACATTGGTCTCCAAAACCAAAGATTCTGGGTTCAAA
TCCTAGTCCCCACGCTA
Downstream region at tRNA end position 
gagcaacagc
Secondary structure (Cloverleaf model)
>PL171000207	Trp	CCA
                   t      GCTA gagcaacagc
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A T C C     A
      C A A        A      | | + | |     A
    T       T G T G       C T G G G     C
    A       | | | |                 T T
    G       A C A C
      G T A        A     AGATT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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