The detailed information of tRNA gene sequence


Sequence ID>PL171000210
Genome IDCP000032
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRuegeria pomeroyi DSS-3 plasmid:megaplasmid
Start position on genome 75805
End posion on genome 75879
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccgtttccgt
tRNA gene sequence 
GCCCGGGTAGCTCAGGGGTAGAGCAGTGGATTGAAAATCCTCGTGTCGGTGGTTCGATTC
CGCCCCCGGGCACCA
Downstream region at tRNA end position 
ttttaccaaa
Secondary structure (Cloverleaf model)
>PL171000210	Phe	GAA
                   t      ACCA ttttaccaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C C G C C     A
        G A        A      | | + | |     G
      G     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GTGTC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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