The detailed information of tRNA gene sequence


Sequence ID>PL171000228
Genome IDCP000376
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRuegeria sp. TM1040 plasmid:megaplasmid
Start position on genome 511596
End posion on genome 511672
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaacaaacaa
tRNA gene sequence 
CGCGGGATGGAGCAGCCAGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACTCCCGCAACCA
Downstream region at tRNA end position 
aatcaaatac
Secondary structure (Cloverleaf model)
>PL171000228	Met	CAT
                   a      ACCA aatcaaatac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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