The detailed information of tRNA gene sequence


Sequence ID>PL171000233
Genome IDCP000376
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRuegeria sp. TM1040 plasmid:megaplasmid
Start position on genome 690536
End posion on genome 690461
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
agtgcagagt
tRNA gene sequence 
GCCCCTATAGCTCAGCTGGTAGAGCAACTGATTTGTAATCAGTAGGTCCGCGGTTCGAGT
CCGTGTGGGGGCACCA
Downstream region at tRNA end position 
ttcttttcaa
Secondary structure (Cloverleaf model)
>PL171000233	Thr	TGT
                   t      ACCA ttcttttcaa
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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