The detailed information of tRNA gene sequence


Sequence ID>PL171000240
Genome IDCP000376
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRuegeria sp. TM1040 plasmid:megaplasmid
Start position on genome 177007
End posion on genome 176932
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgcttaagat
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGGAGTTCGATC
CTCCTAGGCTCCACCA
Downstream region at tRNA end position 
ttcttgccct
Secondary structure (Cloverleaf model)
>PL171000240	Ala	TGC
                   t      ACCA ttcttgccct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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