The detailed information of tRNA gene sequence


Sequence ID>PL171000335
Genome IDCP001511
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylobacterium extorquens AM1 plasmid:megaplasmid
Start position on genome 1162482
End posion on genome 1162555
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
gacgtggtat
tRNA gene sequence 
TGGGGGATAGTTTAACGGTAGAACGGCGGACTCTGACTCCGCTAGTCCTGGTTCGAATCC
AGGTCCCCCAGCCA
Downstream region at tRNA end position 
aacaacgaca
Secondary structure (Cloverleaf model)
>PL171000335	Gln	CTG
                   t      GCCA aacaacgaca
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G G A C C     A
        A A        A      | | | | |     G
      C     T T T G       C C T G G     C
      G     + | | |                 T T
      G     G A A C
        T A        G     TAGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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