The detailed information of tRNA gene sequence


Sequence ID>PL171000343
Genome IDCP001870
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 plasmid:pHM300
Start position on genome 241679
End posion on genome 241595
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctcgcaact
tRNA gene sequence 
GGTGGGATGACAGAGTGGACTAATGTGCCTGCTTGGAAAGCAGGTGGCCGAGAGGCCTCG
TGGGTTCGAATCCCATTCCCACCGCtc
Downstream region at tRNA end position 
tgcgtgttgg
Secondary structure (Cloverleaf model)
>PL171000343	Ser	GGA
                   t      GCtc tgcgtgttgg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G A C A       G T G G G     C
    G         | | |                 T T
    A       A T G T
      C T A        G     TGGCCGAGAGGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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