The detailed information of tRNA gene sequence


Sequence ID>PL171000378
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 6236
End posion on genome 6311
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaccattat
tRNA gene sequence 
GGATCTTTAGCTCAGTAGGTAGAGCGTGCGGCTCATAACCGCTTGGTCACAGGTTCGACT
CCTGTAAGATCCACCA
Downstream region at tRNA end position 
aatattgacg
Secondary structure (Cloverleaf model)
>PL171000378	Met	CAT
                   t      ACCA aatattgacg
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     T - A
                     T - A          T C
                    T     T G T C C     A
      T G A        A      | | | | |     G
    A       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    T   T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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