The detailed information of tRNA gene sequence


Sequence ID>PL171000380
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 6397
End posion on genome 6470
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagccaatat
tRNA gene sequence 
GGGGCAATAGTTTAACGGTAGAACAACGGCTTCCAACCCCGTTGGTGTGGGTTCAATTCC
TGCTTGCCCTGCCA
Downstream region at tRNA end position 
aaaagttttt
Secondary structure (Cloverleaf model)
>PL171000380	Trp	CCA
                   t      GCCA aaaagttttt
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T T
                    T     C G T C C     A
        A A        A      | + + | |     A
      C     T T T G       G T G G G     C
      G     + | | |                 T T
      G     G A A C
        T A        A     TGGT
                    A - T
                    C - G
                    G - C
                    G - C
                    C   C
                  T       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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