The detailed information of tRNA gene sequence


Sequence ID>PL171000387
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 7241
End posion on genome 7317
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taccaaatat
tRNA gene sequence 
GGCGGAGTGGAGCAGTCTGGTAGCTCGTTTGGCTCATAACCAAGAGGTCAAGGGTTCAAA
TCCCTTCTCCGCAACCA
Downstream region at tRNA end position 
tgtatggggt
Secondary structure (Cloverleaf model)
>PL171000387	Met	CAT
                   t      ACCA tgtatggggt
                     G   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     A
    C       C G A G       A A G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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