The detailed information of tRNA gene sequence


Sequence ID>PL171000393
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 8301
End posion on genome 8378
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gattggatct
tRNA gene sequence 
GGTTTTGTAGCTCAATTTGGTTAGAGCACTCCGTTGTCAGCGGAAAGCTTGCGAGTTCAA
GTCTCGTCGAAACCGCCA
Downstream region at tRNA end position 
atatatatgg
Secondary structure (Cloverleaf model)
>PL171000393	Asp	GTC
                   t      GCCA atatatatgg
                     G - C
                     G - C
                     T - A
                     T - A
                     T - A
                     T + G
                     G - C          T G
                    T     T G C T C     A
    T T A A        A      + | | | |     A
  T         C T C G       G C G A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     AGCTT
                    C   A
                    T - A
                    C - G
                    C - G
                    G - C
                  T       G
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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