The detailed information of tRNA gene sequence


Sequence ID>PL171000396
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 8647
End posion on genome 8720
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttcatcttat
tRNA gene sequence 
GCGGGTGTAGTTTAGCGGTAGAATGTCTGCCTTCCAAGCAGACGGTACGGGTTCGATTCC
CGTTACCCGCTCCA
Downstream region at tRNA end position 
atatggacag
Secondary structure (Cloverleaf model)
>PL171000396	Gly	TCC
                   t      TCCA atatggacag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T          T T
                    T     T G C C C     A
        G A        A      | | | | |     G
      C     T T T G       A C G G G     C
      G     + | | +                 T T
      G     G A A T
        T A        G     CGGT
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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