The detailed information of tRNA gene sequence


Sequence ID>PL171000400
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 9775
End posion on genome 9849
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgcaccatat
tRNA gene sequence 
GCTGGCTTGGTTTAGAGGAAGAACGCCTGCCTTGTAAGCAGGATGTCGGGGGTTCGAATC
CCTCAGCCAGCACCA
Downstream region at tRNA end position 
tgatttaagc
Secondary structure (Cloverleaf model)
>PL171000400	Thr	TGT
                   t      ACCA tgatttaagc
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     C T C C C     A
        G A        G      | + | | |     G
      A     T T T G       G G G G G     C
      G     + | | |                 T T
      G     G A A C
        A A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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