The detailed information of tRNA gene sequence


Sequence ID>PL171000403
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 14394
End posion on genome 14481
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cattttttac
tRNA gene sequence 
GGATCGTTGGCAGAGAGGCTTAATGCATCATCTTGGAAAGGTGACGGGTGTAAAAGCCCC
GTAGGTTCGAATCCTACACGATCCGCCA
Downstream region at tRNA end position 
caaatatctg
Secondary structure (Cloverleaf model)
>PL171000403	Ser	GGA
                   c      GCCA caaatatctg
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C A T C C     A
      A G A        G      | | | | |     G
    G       G A C G       G T A G G     C
    G         | | |                 T T
    C       A T G C
      T T A        A     CGGGTGTAAAAGCCCC
                    T - A
                    C - G
                    A - T
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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