The detailed information of tRNA gene sequence


Sequence ID>PL171000404
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 14567
End posion on genome 14654
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagatcaatt
tRNA gene sequence 
GGAGAGTTGACAGAGAGGCTTAATGTGCCAGTTTCGAAAACTGGAGGGTGTAACAGCTCC
AAGGGTTCAAATCCCTTACTCTCCACCA
Downstream region at tRNA end position 
actatggaag
Secondary structure (Cloverleaf model)
>PL171000404	Ser	CGA
                   t      ACCA actatggaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      A G A        G      | | | | |     A
    G       G A C A       A A G G G     C
    G         | | |                 T T
    C       A T G T
      T T A        G     AGGGTGTAACAGCTCC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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