The detailed information of tRNA gene sequence


Sequence ID>PL171000405
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 14660
End posion on genome 14751
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caccaactat
tRNA gene sequence 
GGAAGTATGTCCGAATGGTAAGGGGACGCTCTTGAAAAGCGTTTAAGGCGGTGCGATCCG
CTGTGGGGGTTCAAGTCCCTCTACTTCCGCCA
Downstream region at tRNA end position 
tatacaatac
Secondary structure (Cloverleaf model)
>PL171000405	Ser	TGA
                   t      GCCA tatacaatac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     A - T          T G
                    T     C T C C C     A
        A A        G      | + | | |     A
      T     G C C T       G G G G G     C
      G       | | +                 T T
      G     A G G G
        T A        G     TTAAGGCGGTGCGATCCGCTGT
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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