The detailed information of tRNA gene sequence


Sequence ID>PL171000406
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 231641
End posion on genome 231555
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cactctattT
tRNA gene sequence 
GCGGGGGTGGCGGAATCGGCAGACGCATCGGACTTAAAATCCGAGGTCATTGTGACGTGA
GGGTTCGAGTCCCTCTCTCCGCATCA
Downstream region at tRNA end position 
tgaaatgata
Secondary structure (Cloverleaf model)
>PL171000406	Leu	TAA
                   T      ATCA tgaaatgata
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    C       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     GGTCATTGTGACGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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