The detailed information of tRNA gene sequence


Sequence ID>PL171000443
Genome IDCP002282
Search identical group
Phylum/ClassFusobacteria
SpeciesIlyobacter polytropus DSM 2926 plasmid:pILYOP01
Start position on genome 712480
End posion on genome 712387
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttgaaaaaat
tRNA gene sequence 
GGAAGTGTATGAGCAACTGGTGTTCTTCCCGGTCTTCAAAACCGTGTGGGCGGCGTGAGT
CGTCGGTAGGTTCGATTCCTACACATTTCCGCCA
Downstream region at tRNA end position 
taatttttaa
Secondary structure (Cloverleaf model)
>PL171000443	SeC(p)	TCA
                   t      GCCA taatttttaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     T - A
                     G - C
                     T - A          T T
                    A     C A T C C     A
      C A A        T      | | | | |     G
    T       C G A G       G T A G G     C
    G         | | +                 T T
    G       T C T T
      T G T        C     GTGGGCGGCGTGAGTCGTCG
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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