The detailed information of tRNA gene sequence


Sequence ID>PL171000454
Genome IDCP002404
Search identical group
Phylum/ClassFirmicutes
SpeciesRuminococcus albus 7 = DSM 20455 plasmid:pRUMAL01
Start position on genome 102213
End posion on genome 102287
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgatagaaaT
tRNA gene sequence 
AGGAGAATAGTTCAATGGCTAGAATGACGGTCTCCAAAACCGTAGATCTCAGTTCGACTC
TGAGTTCTCCTGTCt
Downstream region at tRNA end position 
atactacagg
Secondary structure (Cloverleaf model)
>PL171000454	Trp	CCA
                   T      GTCt atactacagg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T          T C
                    T     G A G T C     A
      T A A        A      | | | | |     G
    G       C T T G       C T C A G     C
    G       | | | +                 T T
    C       G A A T
      T A          G     AGAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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