The detailed information of tRNA gene sequence


Sequence ID>PL171000455
Genome IDCP002404
Search identical group
Phylum/ClassFirmicutes
SpeciesRuminococcus albus 7 = DSM 20455 plasmid:pRUMAL01
Start position on genome 102706
End posion on genome 102799
Amino Acid Pseudo
Anticodon GGA
Upstream region at tRNA start position 
cccaccataT
tRNA gene sequence 
GTTGGCATAACCCTAACTGGTAAGGGATCGTCTTGGAAAGGCGAGAGTAATCGGAGTTTT
CCGATGTTTCGGTTCGAATCCGAATGCCGACGTta
Downstream region at tRNA end position 
tgcgctgtgt
Secondary structure (Cloverleaf model)
>PL171000455	Pseudo	GGA
                   T      GTta tgcgctgtgt
                     G - C
                     T - A
                     T + G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     A A G C C     A
      A A T        A      | | | | |     G
    C       C C C A       T T C G G     C
    T         | |                   T T
    G       A G G G
      G T A        A     GAGTAATCGGAGTTTTCCGATGT
                    T - A
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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