The detailed information of tRNA gene sequence


Sequence ID>PL171000483
Genome IDCP003018
Search identical group
Phylum/ClassFirmicutes
SpeciesBacillus megaterium WSH-002 plasmid:WSH-002_p1
Start position on genome 1146
End posion on genome 1238
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tacagtacac
tRNA gene sequence 
GGAGGAATACCCAAGTCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGGGTGTTAAAG
CCCGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
ttttctattt
Secondary structure (Cloverleaf model)
>PL171000483	Ser	TGA
                   c      GCCA ttttctattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGGTGTTAAAGCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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