The detailed information of tRNA gene sequence


Sequence ID>PL171000490
Genome IDCP003110
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli O55:H7 str. RM12579 plasmid:p12579_1
Start position on genome 65462
End posion on genome 65537
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
catcgccaat
tRNA gene sequence 
GCCGGTTTAGCTCAGTTGGTAGAGCGCCTGCCTTGTAAGCAGGATGTCAGCGGTTCGAGT
CCGTTAATCGGCACCA
Downstream region at tRNA end position 
gcacaacagg
Secondary structure (Cloverleaf model)
>PL171000490	Thr	TGT
                   t      ACCA gcacaacagg
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A
                     T - A          T G
                    T     T T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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