The detailed information of tRNA gene sequence


Sequence ID>PL171000641
Genome IDCP007130
Search identical group
Phylum/ClassGemmatimonadetes
SpeciesGemmatirosa kalamazoonesis KBS708 plasmid:2
Start position on genome 460223
End posion on genome 460127
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcgcgcgcat
tRNA gene sequence 
GGGGGCGGATGGGGTCTGGTGGCCTCCTCGGTCTTCAAAACCGATGCGACCCGGTTCCGC
CGGGTTTGGTGGGTTCGATTCCCGCACGCTTCCGCCA
Downstream region at tRNA end position 
gcgcccgtac
Secondary structure (Cloverleaf model)
>PL171000641	SeC(p)	TCA
                   t      GCCA gcgcccgtac
                     G - C
                     G - C
                     G + T
                     G + T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     C G C C C     A
      T C T        T      | + | | |     G
    G       G G G G       G T G G G     C
    G       | | + |                 T T
    T       C C T C
      G G          C     TGCGACCCGGTTCCGCCGGGTTTG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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