The detailed information of tRNA gene sequence


Sequence ID>PL171000653
Genome IDCP007648
Search identical group
Phylum/ClassFirmicutes
SpeciesLactobacillus salivarius JCM1046 plasmid:pMP1046B
Start position on genome 46598
End posion on genome 46689
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggttatattT
tRNA gene sequence 
GGTAAGTTACTCAAGTTGGTGAAGAGGACTGTTTGCTAAACAGTTAGGTCTGCGATTGTG
GACGCAAGGGTTCGAGTCCCTTACTTACCGTta
Downstream region at tRNA end position 
acaattaaat
Secondary structure (Cloverleaf model)
>PL171000653	Ser	GCT
                   T      GTta acaattaaat
                     G - C
                     G - C
                     T - A
                     A - T
                     A - T
                     G - C
                     T - A          T G
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       A C T C       A A G G G     C
    G         | | |                 T T
    G       A G A G
      T G A        G     TAGGTCTGCGATTGTGGACGC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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