The detailed information of tRNA gene sequence


Sequence ID>PL171000683
Genome IDCP007795
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAzospirillum brasilense Az39 plasmid:AbAZ39_p2
Start position on genome 52393
End posion on genome 52318
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggcggcgac
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAGC
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
ttcgacgcaa
Secondary structure (Cloverleaf model)
>PL171000683	Trp	CCA
                   c      GCCA ttcgacgcaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          C G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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