The detailed information of tRNA gene sequence


Sequence ID>PL171000698
Genome IDCP008948
Search identical group
Phylum/ClassActinobacteria
SpeciesRhodococcus opacus R7 plasmid:pPDG1
Start position on genome 168032
End posion on genome 167956
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgcggtgat
tRNA gene sequence 
GGGGCGGTAGCTCAGTCGGTGAGAGCCGTGGACTCATAATCCATTGGTCGCGGGTTCGAG
CCCCGCCCGCCCCACCG
Downstream region at tRNA end position 
cgtcgccggg
Secondary structure (Cloverleaf model)
>PL171000698	Met	CAT
                   t      ACCG cgtcgccggg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T G A        C     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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