The detailed information of tRNA gene sequence


Sequence ID>PL171000758
Genome IDCP009417
Search identical group
Phylum/ClassFirmicutes
SpeciesJeotgalibacillus malaysiensis D5 plasmid:unnamed
Start position on genome 400802
End posion on genome 400717
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcttatctat
tRNA gene sequence 
GGAGATGTACTCAAGCGGTCAAGAGGGCGTCTTGGAAAGGCGTTAGGCGGTCATACGTGC
GTGGGTTCGAATCCCACCATCTCCACtt
Downstream region at tRNA end position 
gcaaaacttc
Secondary structure (Cloverleaf model)
>PL171000758	Ser	GGA
                   t      ACtt gcaaaacttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     G
    G       A C T C       G T G G G     C
    G         | | |                 T T
    T       A G A G
      C A          G     TAGGCGGTCATACGTGC
                    G + T
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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