The detailed information of tRNA gene sequence


Sequence ID>PL171000766
Genome IDCP009882
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPantoea sp. PSNIH1 plasmid:pPSP-26e
Start position on genome 15850
End posion on genome 15767
Amino Acid Pseudo
Anticodon TTA
Upstream region at tRNA start position 
acccgtttat
tRNA gene sequence 
GGTGATGTAGCTCAGGGGAATGAGCGTCCGGCTTTAACTCAGGAGTACGGAAGGTCGCTG
GTTCAAATCCAGCCGTCACTGCCA
Downstream region at tRNA end position 
gtttcagtac
Secondary structure (Cloverleaf model)
>PL171000766	Pseudo	TTA
                   t      GCCA gtttcagtac
                     G + T
                     G - C
                     T - A
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     C G A C C     A
      G G A        A      | | | | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    A       G A G C
      A T          G     AGTACGGAAGGTC
                    T + G
                    C - G
                    C   A
                    G - C
                    G + T
                  C       C *
                  T       A
                    T T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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