The detailed information of tRNA gene sequence


Sequence ID>PL171000823
Genome IDCP010825
Search identical group
Phylum/ClassDeinococcus-Thermus
SpeciesThermus aquaticus Y51MC23 plasmid:pTA69
Start position on genome 57523
End posion on genome 57448
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccgggcgcgt
tRNA gene sequence 
GTGCCCCTAGCTCAATCGGCAGAGCACCCGTCTCCAAAACGGGAGGGTCCGGGTTCGAGT
CCCGGGGGGTACGCCA
Downstream region at tRNA end position 
aggaaagccc
Secondary structure (Cloverleaf model)
>PL171000823	Trp	CCA
                   t      GCCA aggaaagccc
                     G - C
                     T - A
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G          T G
                    T     G G C C C     A
      T A A        A      | | | | |     G
    C       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGGT
                    C - G
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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