The detailed information of tRNA gene sequence


Sequence ID>PL171000845
Genome IDCP011970
Search identical group
Phylum/ClassPeptoclostridium
SpeciesPeptoclostridium phage phiCDIF1296T strain DSM 1296
Start position on genome 128597
End posion on genome 128687
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atagaaatat
tRNA gene sequence 
GGAGAGGTACTCAAGTGGTAAAGAGGATAGTTTGCTAAACTATTAGGTCAATTAATTTGA
TACGAGGGTTCAAATCCCTTCCTCTCTTCCA
Downstream region at tRNA end position 
ataaaaaaag
Secondary structure (Cloverleaf model)
>PL171000845	Ser	GCT
                   t      TCCA ataaaaaaag
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    T       A G A G
      A A          G     TAGGTCAATTAATTTGATAC
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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