The detailed information of tRNA gene sequence


Sequence ID>PL171000966
Genome IDCP013125
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas mendocina S5.2 plasmid:pPME5
Start position on genome 54767
End posion on genome 54691
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
caggtgttgc
tRNA gene sequence 
GCAGAGGTAGCTCAGCTGGATAGAGCGGCCGCCTCCTAAGCGGCAGGTCGCGGGTTCGAA
TCCCGCCTTTTGCGCCA
Downstream region at tRNA end position 
gattttttag
Secondary structure (Cloverleaf model)
>PL171000966	Arg	CCT
                   c      GCCA gattttttag
                     G - C
                     C - G
                     A - T
                     G + T
                     A - T
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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