The detailed information of tRNA gene sequence


Sequence ID>PL171000969
Genome IDCP013125
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas mendocina S5.2 plasmid:pPME5
Start position on genome 54092
End posion on genome 54004
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caactaaata
tRNA gene sequence 
GGACGCTTGGCCGAGTGGCTTAAGGCAGCAGTCTTGAAAACTGTCGAAGGTTCCGCCTTC
CGGGAGTTCGAATCTCCCAGCGTCCGCCA
Downstream region at tRNA end position 
cctcccccac
Secondary structure (Cloverleaf model)
>PL171000969	Ser	TGA
                   a      GCCA cctcccccac
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G A G     C
    G         | | |                 T T
    C       A G G C
      T T A        A     CGAAGGTTCCGCCTTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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